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In tropical environments like Nigeria, seasonal variation is one of the major non-genetic factors that affect poultry production. For instance, the cold rainy season affects both poultry production and the general well-being of poultry.

The rainy season is usually synonymous with an increase in relative humidity and a reduction in temperature; rainfall affects both the quality and quantity of feeding, while wind speed has an impact on the outbreak of diseases.

Poultry birds and poultry production are generally affected by seasonal climatic or weather changes. For instance, in the wet or cold season, chickens eat more feed, drink less water and huddle together to generate heat and keep themselves warm. On the other hand, chickens and other livestock birds consume less feed and drink more water in the hot season or weather in order to cool their body. These changes affect the production of birds, most especially laying birds, as egg production is reduced in extremely cold or hot weather. This reduction in egg production occurs because when there are extreme cold or hot conditions, these birds are stressed, and their ability to withstand diseases or immune systems is seriously affected.

Some certain poultry diseases are rampant in the wet, rainy or cold seasons i.e. the onset of rain favors the propagation and spread of the causative organisms of these diseases and parasites. Hence, most poultry farmers experience high morbidity and mortality rate during this period.

Some of the diseases common during the rainy season will be discussed below.

  1. Fowl Pox

Fowl pox is a highly contagious disease that affects poultry birds at any age. It is caused by poxvirus transmitted by mostly mosquitoes and other blood-sucking insects. The reason why fowl pox is prevalent during the wet season is that mosquitoes, being the vector, breed well in this season due to the abundance of stagnant water. Also, the incidence of wet litter becomes apparent when poultry houses are not adequately shielded from rain. This leads to the development of wet liter which then predisposes to fly problems in the pen.

How to Recognize  Fowl Pox in Chickens

There are some visible things you will notice, which are proofs that your chickens or turkeys have come down with fowlpox disease. Fowl pox leads to the development of round lesions with scabby centers on the skin of the birds. The majority of the skin lesions are located on the wattle, face, comb, and some are occasionally located on the legs. This disease also affects the mouth and windpipe linings. The lesions that are formed in the throat can develop to the extent of blocking the throat and it could eventually lead to death as a result of suffocation. Lesions on the face can extend to the eyes, causing temporary or permanent blindness of the affected bird.

How to Prevent Fowlpox in Chickens 

The mechanical carriers of fowl pox are mosquitoes. So it is advisable to reduce the mosquitoes around your farm or environment. Ordinary sanitation and management practices will not avert this disease, so vaccination is often the solution. It is recommended to vaccinate chickens and turkeys such as breeders, egg layers, and those that are highly susceptible to fowl pox. Live fowlpox vaccine is administered in the wing web of birds within age 6 and 10 weeks. If aggressive pecking is controlled among birds, skin damage which fowl pox causes is reduced.

How to Treat Fowlpox in Chickens 

Unfortunately, fowlpox has no treatment once the fowlpox virus has affected a bird. But as long as a diseased bird is eating and drinking, it will recover from the disease in about two weeks or more with low mortality rate. When a bird recovers successfully from fowlpox, it is immune to the disease permanently.

  1. Fowl Cholera

Fowl Cholera is a bacterial disease that affects birds of age 6 weeks old and above. The bacterium responsible for this is Pasteurella multocida. It is highly contagious and mortality in acute cases is high. The causative organism is spread readily during the rainy season because wet liter serves as an abode of numerous microorganisms.

How to Recognize Fowl Cholera in Chickens

In acute cases, birds that appear healthy die suddenly while in chronic cases the affected birds show the following:

  • Yellow, green or grey diarrhoea
  • Loss of appetite
  • Laboured breathing
  • Drooped wings and tail feathers
  • Ruffled feathers
  • Swelling of the leg joints, sinuses, wattle and foot pad
  • Twisting of the neck (torticolis)
  • Discharge from the nostril or beak

Note: The above signs are also similar to those of fowl typhoid.

How to Treat, Prevent, and Control Fowl Cholera in Chickens

Fowl cholera can be treated using sulfa drugs, tetracycline, and erythromycin. Poultry birds can be vaccinated against fowl cholera by administering a fowl cholera vaccine. Maintain proper hygiene and sanitation. Practice a high level of biosecurity and prevent rodents, wild birds, and other animals.

  1. Salmonellosis, Escherichia coli, Pullorum Disease (Bacillary White Diarrhoea)

These bacterial diseases affect birds of all ages. They are endemic in farms or pens with poor sanitation, such as is seen when wet liter is allowed to stay for a long time. They affect the digestive system of the infected birds.

How to Recognize Salmonellosis, Escherichia coli, Pullorum in Chickens

  • Severe diarrhoea
  • Loss of appetite
  • Depression and emaciation
  • Chicks suffer omphalitis
  • White pasty diarrhoea in pullorum disease
  • Huddling together and laboured breathing

How to Treat, Prevent, and Control Salmonellosis, Escherichia coli, Pullorum

Salmonellosis, E. coli and Pullorum diseases can be treated by administering a broad-spectrum antibiotic to the flock. High-level farm/pen hygiene and sanitation must be maintained. Biosecurity measures should be in place. Avoid feeding birds with contaminated feeds.

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  1. Aspergillosis

Aspergillosis is the disease caused by Aspergillus fumigatus in poultry. Due to the high humidity during the cold season, feeds or litter dampens, thus creating a favourable environment for fungus to grow and thrive. The birds also inhale Aspergillus spores and these spores develop into lesions filling the lungs causing respiratory problems or discomforts. Birds under intensive management systems would experience high disease spread if the stocking density is high and ventilation is inadequate or poor. 

How to Recognize Aspergillosis in Chickens

There are a wide range of clinical signs presented in birds with aspergillosis. This is because they vary depending on how the chicken became infected, where lesions develop in their body, the organ(s) involved, and their overall health status (immune system). Aspergillosis may be acute or chronic in nature.

  • Acute form: This generally occurs in young chicks and results in high morbidity and mortality. Onset is very quick and usually develops within a week. Most affected birds will die within a few days without emergency veterinary care. The most common signs include; Lethargy, depression, loss of appetite, difficulty in breathing, and cyanosis (bluish/purplish comb).
  • Chronic form: This is usually very subtle in onset, and it may take several weeks or months to develop. It is most common in older birds, many with a history of malnutrition, stress, concurrent illness, or prolonged antibiotic/corticosteroid use. The entire course of the disease ranges from less than 1 week to over 6 weeks in duration. The most common clinical signs observed include Weight loss, reduced appetite, exercise intolerance, increased respiratory rate,  changes in vocalization (voice), often more apparent in roosters,  audible respiratory sounds, tail bobbing, and open-mouthed breathing.

A presumptive diagnosis of aspergillosis can usually be made based on the history of the flock, clinical signs, and physical examination. In order for your veterinarian to obtain a definite diagnosis of Aspergillosis, they will need to collect some samples and send them to a diagnostic laboratory, to confirm the presence of Aspergillus in the bird.

How to Prevent Aspergillosis in Chickens

Dry, good quality litter and feed and hygiene will help in the prevention of aspergillosis. Antifungal drugs such as Thiabendazole or Nystatin can be used in feed.

How to Treat Aspergillosis in Chickens

Usually none. Environmental spraying with effective antifungal antiseptic may help reduce the challenge. Amphotericin B and Nystatin have been used in high-value birds.

  1. Coccidiosis

Coccidiosis is caused by protozoan Eimeria sp in poultry, most species infect various sites in the intestine. The infectious process is rapid (4–7 days) and is characterized by parasite replication in host cells with extensive damage to the intestinal mucosa. Poultry coccidia is generally host-specific, and the different species parasitize specific parts of the intestine. However, in-game birds, including quail, the coccidia may parasitize the entire intestinal tract. Coccidia is distributed worldwide in poultry, game birds reared in captivity, and wild birds.

The wet litter and the hot pen temperature commonly observed in the rainy season favours the sporulation of the coccidian oocyst and therefore, the outbreak of coccidiosis.

How to Recognize Coccidiosis in Chickens

Clinically, bloody faeces, ruffled feathers, anaemia, and somnolence are observed. Other signs of coccidiosis range from decreased growth rate to a high percentage of visibly sick birds, severe diarrhoea, and high mortality. Feed and water consumption are depressed. Weight loss, development of culls, decreased egg production, and increased mortality may accompany outbreaks. Mild infections of intestinal species, which would otherwise be classed as subclinical, may cause depigmentation and potentially lead to secondary infection, particularly Clostridium spp infection. Survivors of severe infections recover in 10–14 days but may never recover lost performance.

The lesions are almost entirely in the intestinal tract and often have a distinctive location and appearance that is useful in diagnosis.

How to Prevent Coccidiosis in Chickens

Basic hygiene is your first step for prevention. It is good to ensure that the poultry house is generally clean and dry.

  • Ensure water is clean and fresh. Keep feeding areas clean and dry.
  • Ensure the birds have enough space i.e. overcrowding should be prevented as it is a predisposing factor for coccidiosis. Chickens need an average of a square meter for 3-5 birds.
  • If your chicks have not been vaccinated against coccidiosis, provide medicated starter feed for them. Anticoccidial medication should be given to the chicks at around 12 days of age (this might vary depending on the vaccination schedule being followed).
  • An all-in all-out method should be employed on the farm in order to prevent a horizontal transfer of infection. If this method is not feasible, keep the new batch quarantined for a minimum of two weeks, for the protection of the current stock.

How to Treat Coccidiosis in Chickens

Once coccidiosis is diagnosed in a flock, all the birds need to be treated. Also, the litter needs to be changed so that birds do not pick up the sporulated oocyst from the droppings of affected birds. Common anticoccidial drugs include; Amprolium, toltrazuril, sulfaquinoxaline etc.

How to Manage Poultry Birds Optimally in the Cold or Rainy Season

Managing Chickens in the Tropics2

To manage poultry such as broilers, turkeys, quails, ducks, and pheasants during cold or rainy periods, poultry farmers have to do the following:

  • Add oil or fat to the diet of the birds or reduce the level of nutrients that are not required by the birds to generate heat. This is necessary to avoid wastage and reduce feed production costs since birds consume more feed to generate heat.
  • Install electric bulbs or a heater in the pen to serve as a secondary source of heat for the birds. This would help the birds drink enough water and stay warm without getting the reserved energy used up in the process.
  • Though very rare in an intensive system but rampant in a free-range system, birds drink from the stagnant water around, thus picking up eggs of parasitic organisms such as intestinal worms. That is why it is important to deworm poultry birds bi-monthly with effective dewormers such as piperazine. A broad-spectrum antibiotic like oxytetracycline should be administered to the birds every month.
  • Construct a generous roof overhang over the entrance and sides of pens to prevent rainwater from getting into the pen whenever it rains. Construct a foot dip at the entrances of the pens and a strong disinfectant solution should be in the foot dip always.
  • Vaccinate birds at the right time.

The rainy season, with its unique challenges, requires a high level of vigilance and preparation to manage the health issues it brings. The diseases we’ve discussed present significant threats to poultry health. Recognizing the symptoms and effects of these diseases can be the difference between a thriving flock and devastating losses. Remember, disease management is not just about reacting to health issues when they arise. It’s about taking proactive steps to prevent them in the first place. So, let’s rise to this challenge and work towards healthier and more productive poultry operations.

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21 thoughts on “Common Poultry Diseases During the Rainy Season – Signs, Prevention, and Treatment

  1. Chat_____________(( Ro bins on bu cler )) g ma i l m… says:

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  2. Olajire Taofiq Ajibola says:

    I really enjoyed reading it. And it very educative. Thanks.

  3. Ogaga meshach says:

    good morning please I just started poutry is my first time please i notice my fowl can’t breath well what should i do please I need ur advise

    1. Hello Ogaga,

      Thank you for reaching out to us.
      Regarding your enquiry on breathing problems in poultry, we advise that you contact your veterinarian for proper diagnosis and treatment.

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      Email: [email protected]

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    2. Stella Jelagat says:

      thanks for the information can natural antibiotic do treat all the disease

      1. Hello Stella,

        Thank you for reaching out to us.

        There isn’t a medication that can cure every disease in poultry.

        Kindly click here to explore our variety of veterinary medince. You can contact your veterinarian for more information.

      2. Daniel Agbo says:

        Pls if there’s a WhatsApp group of some sort it will be appreciated,came across this article randomly and it seems well detailed

        Kindly reach out with a link of some sort for social media group or profile

        1. You can join our community from our quick links page:

  4. Omotoyosi says:

    Wow very good, this will enhance good running of our farm

  5. Austin Okwelum says:


    Please i just want to start a poultry Farm.But a friend told me i can not start now because it is rainy season(June)that i should wait till September. Please i need your advice.

    1. Goodness Eshett says:

      Hello Austin,

      Thank you for reaching out to us
      As regards your enquiry, we have a monthly online training on poultry farming and you can get an email update on the next training date when you register via the form below:

      We also have ebooks on poultry production via the link below;

      Thank you for choosing Afrimash

  6. zachariah abugri says:

    I am so much happy about your regarding poultry farming, am starter showing in poultry farming my major line is eggs production, am in the tropics , Ghana in the northern with frequent weather changes, I following on information materials how again can you help me? can you create an interpersonal platform for one on one advice?

    1. Goodness Eshett says:

      Hello Zachariah,

      Thank you for reaching out to us,
      As regards your enquiry, we have a platform where you can book a session to discuss with a veterinary doctor who is vast in the poultry business experience
      You can visit to book a session

      Also, we have a couple of Ebooks on poultry business and you can view them through the link below;

      To get an update on our next training on poultry farming in the month of May, kindly subscribe to our newsletter:

      Don’t forget to like and follow us on Facebook for various contents relating to poultry farming:

      Thank you for choosing Afrimash

  7. Henry says:

    This is a nice theory I love it and I have gain alot to practice.
    Thanks for your explanations.

    1. Charles Nwishienyi says:

      Dear Henry,

      Good morning and thanks for your response. We are elated you found our article quite informative.
      Kindly feel free to contact us via any channel for further inquiries.
      ​You can contact us via any of the channels below:

      Email: [email protected]
      Call: (+234) 809 409 1115
      WhatsApp: (234) 808 280 8271

      Please click on the link below to be redirected to our WhatsApp page-to chat with our customer care agents.


      1. Paul says:

        This an interesting topic in Poultry farming please I need buy ivermectin based drug in cartoon to be sold to customers, how much is it?

        1. Goodness Eshett says:

          Hello Paul,

          Thank you for reaching out to us
          As regards your enquiry, we have Kepro Ivermectin
          1250 per 100mls
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          To get place an order, you can reach out to us via:
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  8. Ogar Oguda says:

    Please i need your support to be sending me on how to mentain my poultry

    1. Charles Nwishienyi says:

      Dear Oguda,

      Good morning and thanks for your inquiry.
      With regards to poultry management, we have quite a number of expository and informative ebooks on our platform to help you out.
      Kindly click on the link above and review the options available for broiler farming, vaccination and medication.
      ​You can contact us via any of the channels below:

      Email: [email protected]
      Call: (+234) 809 409 1115
      WhatsApp: (234) 808 280 8271

      Please click on the link below to be redirected to our WhatsApp page-to chat with our customer care agents.


    2. Ivan says:

      Inbox the info…

      1. Goodness Eshett says:

        Hello Ivan

        Thank you for choosing Afrimash,
        With regards to poultry management, we have quite a number of expository and informative ebooks on our platform to help you out.
        Kindly click on the link above and review the options available for broiler farming, vaccination and medication.
        Warm regards

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